PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_93736g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bHLH
Protein Properties Length: 272aa    MW: 29869.8 Da    PI: 8.857
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_93736g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.62.2e-1384128855
                    HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     Er RR+++N  +++L++llPk     + K++K  i+ +A++YIk Lq
  MA_93736g0010  84 TERARRSKMNCMLNTLKSLLPKG---FHSKVDKGRIVDEAIDYIKTLQ 128
                    6*********************9...8********************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.30676127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.45E-1580146IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.0E-1581144IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.63E-1281132No hitNo description
SMARTSM003532.6E-1082133IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.2E-1184128IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
MLSGTPFPIM SEYRDSEDLY TIVSAYSTST SSRPVEKQES VVQSKTSGGK RSWAGAISPS  60
LQEDDQGPAS TKKTCPDNKI HVWTERARRS KMNCMLNTLK SLLPKGFHSK VDKGRIVDEA  120
IDYIKTLQAT LKDFQAQKSE MEAHHSRRPL SFTKSEDSHG LHIPPSVPVA SSYPGLKILG  180
SNVMGSHAFI TIWGPHKTGF LPKLFSVLDA NQLEIVNCTI NAVGSNIVYA LHAMSKNNNQ  240
QVTTKALSCT IDELNTTIAG PQEYALQKSS NE
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP12261548
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.13e-14bHLH family protein